Amazon Web Services
Parsons provides utility functions and/or connectors for three different AWS services.
S3: AWS’s object storage service
Redshift: AWS’s data warehousing service, with two additional classes providing utility functions.
Table and View API: Methods for managing tables and views
Schema API: Methods for managing schema
See the documentation for each service for more details.
Lambda
Overview
Parsons’ distribute_task
function allows you to distribute process rows of a table across multiple
AWS Lambda invocations.
If you are running the processing of a table inside AWS Lambda, then you are limited by how many rows can be processed within the Lambda’s time limit (at time-of-writing, maximum 15min).
Based on experience and some napkin math, with the same data that would allow 1000 rows to be processed inside a single AWS Lambda instance, this method allows 10 MILLION rows to be processed.
Rather than converting the table to SQS or other options, the fastest way is to upload the table to S3, and then invoke multiple Lambda sub-invocations, each of which can be sent a byte-range of the data in the S3 CSV file for which to process.
Using this method requires some setup. You have three tasks:
Define the function to process rows, the first argument, must take your table’s data (though only a subset of rows will be passed) (e.g.
def task_for_distribution(table, **kwargs):
)Where you would have run
task_for_distribution(my_table, **kwargs)
instead calldistribute_task(my_table, task_for_distribution, func_kwargs=kwargs)
(either setting env var S3_TEMP_BUCKET or passing abucket=
parameter)Setup your Lambda handler to include
parsons.aws.event_command()
(or run and deploy your lambda with Zappa)
To test locally, include the argument storage="local"
, which will test the distribute_task
function, but run the task sequentially and in local memory.
QuickStart
A minimalistic example Lambda handler might look something like this:
from parsons.aws import event_command, distribute_task
def process_table(table, foo, bar=None):
for row in table:
do_sloooooow_thing(row, foo, bar)
def handler(event, context):
## ADD THESE TWO LINES TO TOP OF HANDLER:
if event_command(event, context):
return
table = FakeDatasource.load_to_table(username='123', password='abc')
# table is so big that running
# process_table(table, foo=789, bar='baz') would timeout
# so instead we:
distribute_task(table, process_table,
bucket='my-temp-s3-bucket',
func_kwargs={'foo': 789, 'bar': 'baz'})
API
- parsons.aws.distribute_task(table, func_to_run, bucket=None, func_kwargs=None, func_class=None, func_class_kwargs=None, catch=False, group_count=100, storage='s3')[source]
Distribute processing rows in a table across multiple AWS Lambda invocations.
- Args:
- table: Parsons Table
Table of data you wish to distribute processing across Lambda invocations of func_to_run argument.
- func_to_run: function
The function you want to run whose first argument will be a subset of table
- bucket: str
The bucket name to use for s3 upload to process the whole table Not required if you set environment variable
S3_TEMP_BUCKET
- func_kwargs: dict
If the function has other arguments to pass along with table then provide them as a dict here. They must all be JSON-able.
- func_class: class
If the function is a classmethod or function on a class, then pass the pure class here. E.g. If you passed ActionKit.bulk_upload_table, then you would pass ActionKit here.
- func_class_kwargs: dict
If it is a class function, and the class must be instantiated, then pass the kwargs to instantiate the class here. E.g. If you passed ActionKit.bulk_upload_table as the function, then you would pass {‘domain’: …, ‘username’: … etc} here. This must all be JSON-able data.
- catch: bool
Lambda will retry running an event three times if there’s an exception – if you want to prevent this, set catch=True and then it will catch any errors and stop retries. The error will be in CloudWatch logs with string “Distribute Error” This might be important if row-actions are not idempotent and your own function might fail causing repeats.
- group_count: int
Set this to how many rows to process with each Lambda invocation (Default: 100)
- storage: str
Debugging option: Defaults to “s3”. To test distribution locally without s3, set to “local”.
- Returns:
Debug information – do not rely on the output, as it will change depending on how this method is invoked.
S3
Overview
The S3
class allows interaction with Amazon Web Service’s object storage service
to store and access data objects. It is a wrapper around the AWS SDK boto3.
It provides methods to upload and download files from S3 as well as manipulate buckets.
Note
- Authentication
Access to S3 is controlled through AWS Identity and Access Management (IAM) users in the AWS Managerment Console . Users can be granted granular access to AWS resources, including S3. IAM users are provisioned keys, which are required to access the S3 class.
QuickStart
S3 credentials can be passed as environmental variables (AWS_ACCESS_KEY_ID
and AWS_SECRET_ACCESS_KEY
),
stored in an AWS CLI file ~/.aws/credentials
, or passed as keyword arguments.
from parsons import S3
# First approach: Pass API credentials via environmental variables or an AWS CLI file
s3 = S3()
# Second approach: Pass API credentials as arguments
s3 = S3(aws_access_key_id='MY_KEY', aws_secret_access_key='MY_SECRET')
# Put an arbitrary file in an S3 bucket
with open('winning_formula.csv') as w:
s3.put_file('my_bucket', 'winning.csv, w)
# Put a Parsons Table as a CSV using convenience method.
tbl = Table.from_csv('winning_formula.csv')
tbl.to_s3_csv('my_bucket', 'winning.csv')
# Download a csv file and convert to a table
f = s3.get_file('my_bucket', 'my_dir/my_file.csv')
tbl = Table(f)
# List buckets that you have access to
s3.list_buckets()
# List the keys in a bucket
s3.list_keys('my_bucket')
API
Redshift
Overview
The Redshift
class allows you to interact with an Amazon Redshift relational database.
The connector utilizes the psycopg2 Python package under the hood. The core methods
focus on input, output and querying of the database.
In addition to the core API integration provided by the Redshift
class, Parsons also includes utility functions for
managing schemas and tables. See Table and View API and Schema API for more information.
Note
- S3 Credentials
Redshift only allows data to be copied to the database via S3. As such, the the
copy()
andcopy_s3()
methods require S3 credentials and write access on an S3 Bucket, which will be used for storing data en route to Redshift. See the API documentation for more information about AWS Redshift authorization.- Whitelisting
Remember to ensure that the IP address from which you are connecting has been whitelisted.
Quickstart
Redshift API credentials can either be passed as environmental variables (REDSHIFT_USERNAME
, REDSHIFT_PASSWORD
,
REDSHIFT_HOST
, REDSHIFT_DB
, and REDSHIFT_PORT
) or as keyword arguments. Methods that use COPY require an
access key ID and a secret access key,
which can also be passed as environmental variables (aws_access_key_id
and aws_secret_access_key
)
or keyword arguments.
from parsons import Redshift
# Pass credentials as environmental variables
rs = Redshift()
# Pass credentials as keyword arguments
rs = Redshift(username='my_username', password='my_password', host='my_host',
db='my_db', port='5439')
# Query the Database
table = rs.query('select * from tmc_scratch.test_data')
# Copy a Parsons Table to the Database
table = rs.copy(tbl, 'tmc_scratch.test_table', if_exists='drop')
All of the standard COPY options can be passed as kwargs. See the copy()
method for all
options.
Core API
Table and View API
Table and view utilities are a series of helper methods, all built off of commonly used SQL queries run against the Redshift database.
- class parsons.databases.redshift.redshift.RedshiftTableUtilities[source]
- table_exists(table_name, view=True)[source]
Check if a table or view exists in the database.
- Args:
- table_name: str
The table name and schema (e.g.
myschema.mytable
).- view: boolean
Check to see if a view exists by the same name
- Returns:
- boolean
True
if the table exists andFalse
if it does not.
- get_row_count(table_name)[source]
Return the row count of a table.
SQL Code
SELECT COUNT(*) FROM myschema.mytable
- Args:
- table_name: str
The schema and name (e.g.
myschema.mytable
) of the table.
- Returns:
int
- rename_table(table_name, new_table_name)[source]
Rename an existing table.
Note
You cannot move schemas when renaming a table. Instead, utilize the
table_duplicate()
. method.- Args:
- table_name: str
Name of existing schema and table (e.g.
myschema.oldtable
)- new_table_name: str
New name for table with the schema omitted (e.g.
newtable
).
- move_table(source_table, new_table, drop_source_table=False)[source]
Move an existing table in the database.It will inherit encoding, sortkey and distkey. Once run, the source table rows will be empty. This is more efficiant than running
"create newtable as select * from oldtable"
.For more information see: ALTER TABLE APPEND
- Args:
- source_table: str
Name of existing schema and table (e.g.
my_schema.old_table
)- new_table: str
New name of schema and table (e.g.
my_schema.newtable
)- drop_original: boolean
Drop the source table.
- Returns:
None
- populate_table_from_query(query, destination_table, if_exists='fail', distkey=None, sortkey=None)[source]
Populate a Redshift table with the results of a SQL query, creating the table if it doesn’t yet exist.
- Args:
- query: str
The SQL query
- destination_table: str
Name of destination schema and table (e.g.
mys_chema.new_table
)- if_exists: str
If the table already exists, either
fail
,append
,drop
, ortruncate
the table.- distkey: str
The column to use as the distkey for the table.
- sortkey: str
The column to use as the sortkey for the table.
- duplicate_table(source_table, destination_table, where_clause='', if_exists='fail', drop_source_table=False)[source]
Create a copy of an existing table (or subset of rows) in a new table. It will inherit encoding, sortkey and distkey.
- Args:
- source_table: str
Name of existing schema and table (e.g.
myschema.oldtable
)- destination_table: str
Name of destination schema and table (e.g.
myschema.newtable
)- where_clause: str
An optional where clause (e.g.
where org = 1
).- if_exists: str
If the table already exists, either
fail
,append
,drop
, ortruncate
the table.- drop_source_table: boolean
Drop the source table
- union_tables(new_table_name, tables, union_all=True, view=False)[source]
Union a series of table into a new table.
- Args:
- new_table_name: str
The new table and schema (e.g.
myschema.newtable
)- tables: list
A list of tables to union
- union_all: boolean
If
False
will deduplicate rows. IfTrue
will include duplicate rows.- view: boolean
Create a view rather than a static table
- Returns:
None
- get_tables(schema=None, table_name=None)[source]
List the tables in a schema including metadata.
- Args:
- schema: str
Filter by a schema
- table_name: str
Filter by a table name
- Returns:
- Parsons Table
See Parsons Table for output options.
- get_table_stats(schema=None, table_name=None)[source]
List the tables statistics includes row count and size.
Warning
This method is only accessible by Redshift superusers.
- Args:
- schema: str
Filter by a schema
- table_name: str
Filter by a table name
- Returns:
- Parsons Table
See Parsons Table for output options.
- get_columns(schema, table_name)[source]
Gets the column names (and some other column info) for a table.
If you just need the column names, run
get_columns_list()
as it is faster.for col in rs.get_columns('some_schema', 'some_table'): print(col)
- Args:
- schema: str
The schema name
- table_name: str
The table name
- Returns:
A dict mapping column name to a dict with extra info. The keys of the dict are ordered just like the columns in the table. The extra info is a dict with format
{ 'data_type': str, 'max_length': int or None, 'max_precision': int or None, 'max_scale': int or None, 'is_nullable': bool }
- get_columns_list(schema, table_name)[source]
Gets the just the column names for a table.
- Args:
- schema: str
The schema name
- table_name: str
The table name
- Returns:
A list of column names.
- get_views(schema=None, view=None)[source]
List views.
- Args:
- schema: str
Filter by a schema
- view: str
Filter by a table name
- Returns:
- Parsons Table
See Parsons Table for output options.
- get_queries()[source]
Return the Current queries running and queueing, along with resource consumption.
Warning
Must be a Redshift superuser to run this method.
- Returns:
- Parsons Table
See Parsons Table for output options.
- get_max_value(table_name, value_column)[source]
Return the max value from a table.
- Args:
- table_name: str
Schema and table name
- value_column: str
The column containing the values
- get_object_type(object_name)[source]
Get object type.
One of view, table, index, sequence, or TOAST table.
- Args:
- object_name: str
The schema.obj for which to get the object type.
- Returns:
str of the object type.
- is_view(object_name)[source]
Return true if the object is a view.
- Args:
- object_name: str
The schema.obj to test if it’s a view.
- Returns:
bool
- is_table(object_name)[source]
Return true if the object is a table.
- Args:
- object_name: str
The schema.obj to test if it’s a table.
- Returns:
bool
- get_table_definition(table)[source]
Get the table definition (i.e. the create statement).
- Args:
- table: str
The schema.table for which to get the table definition.
- Returns:
str
- get_table_definitions(schema=None, table=None)[source]
Get the table definition (i.e. the create statement) for multiple tables.
This works similar to get_table_def except it runs a single query to get the ddl for multiple tables. It supports SQL wildcards for schema and table. Only returns the ddl for _tables_ that match schema and table if they exist.
- Args:
- schema: str
The schema to filter by.
- table: str
The table to filter by.
- Returns:
list of dicts with matching tables.
- get_view_definition(view)[source]
Get the view definition (i.e. the create statement).
- Args:
- view: str
The schema.view for which to get the view definition.
- Returns:
str
- get_view_definitions(schema=None, view=None)[source]
Get the view definition (i.e. the create statement) for multiple views.
This works similar to get_view_def except it runs a single query to get the ddl for multiple views. It supports SQL wildcards for schema and view. Only returns the ddl for _views_ that match schema and view if they exist.
- Args:
- schema: str
The schema to filter by.
- view: str
The view to filter by.
- Returns:
list of dicts with matching views.
- static split_full_table_name(full_table_name)[source]
Split a full table name into its schema and table. If a schema isn’t present, return public for the schema. Similarly, Redshift defaults to the public schema, when one isn’t provided.
Eg:
(schema, table) = Redshift.split_full_table_name("some_schema.some_table")
- Args:
- full_table_name: str
The table name, as “schema.table”
- Returns:
- tuple
A tuple containing (schema, table)
Schema API
Schema utilities are a series of helper methods, all built off of commonly used SQL queries run against the Redshift database.
- class parsons.databases.redshift.redshift.RedshiftSchema[source]
- create_schema_with_permissions(schema, group=None)[source]
Creates a Redshift schema (if it doesn’t already exist), and grants usage permissions to a Redshift group (if specified).
- Args:
- schema: str
The schema name
- group: str
The Redshift group name
- type: str
The type of permissions to grant. Supports select, all, etc. (For full list, see the Redshift GRANT docs)
- grant_schema_permissions(schema, group, permissions_type='select')[source]
Grants a Redshift group permissions to all tables within an existing schema.
- Args:
- schema: str
The schema name
- group: str
The Redshift group name
- type: str
The type of permissions to grant. Supports select, all, etc. (For full list, see the Redshift GRANT docs)